Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 2,951,930 | T→C | Q910Q (CAA→CAG) | recB ← | exonuclease V (RecBCD complex), beta subunit |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 2,951,930 | 0 | T | C | 98.0% | 139.2 / ‑3.6 | 51 | coding (2730/3543 nt) | recB | exonuclease V (RecBCD complex), beta subunit |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (50/0); minor base . (1/0); total (51/0) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
AATCCTGGGCGATACCGTGACCACGCTGTTGCAAACCAGAGTAGCTGGTGACGCGCCAGTTATCG > W3110S.gb/2951902‑2951966 | gagccTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:19769/4‑62 (MQ=255) gaTCCTGAGCGATACCGTGCCCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1210447/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAACCCGGAGTAGCTGGTGACACGCCAGtt > 1:1394955/2‑61 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGtt > 1:414570/2‑61 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGtt > 1:1325500/2‑61 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGtt > 1:1445788/2‑61 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGtt > 1:62678/2‑61 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGtt > 1:653441/2‑61 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGtt > 1:1255338/2‑61 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGtt > 1:678614/2‑61 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGtt > 1:1068955/2‑61 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGtt > 1:913593/2‑61 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:399594/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:408117/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:385576/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:357002/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:347694/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:996546/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:334251/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:468736/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:5669/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:614032/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:669674/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:760767/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:799706/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:819994/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:893631/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:91366/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1005695/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1304514/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1006620/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1034528/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1043288/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:10970/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1131341/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:114201/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1203513/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1217204/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1256012/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:268455/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1309290/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1364512/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1384427/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:1386147/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:156431/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:161020/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:176838/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:238195/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACGCCAGTTa > 1:251096/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGCTGCTGCAAACCGGAGTAGCTGGTGACACCCCAGTTa > 1:1226342/2‑62 (MQ=255) gaTCCTGAGCGATACCGTGACCACGC‑‑‑TGCAAACCGGAGTAGCTGGTGAAACGCCAGTTATCg > 1:413921/2‑62 (MQ=255) | AATCCTGGGCGATACCGTGACCACGCTGTTGCAAACCAGAGTAGCTGGTGACGCGCCAGTTATCG > W3110S.gb/2951902‑2951966 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |