| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 3,943,337 | 2 bp→CA | coding (622‑623/1572 nt) | bcsE ← | conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 3,943,337 | 0 | A | C | 100.0% | 301.9 / NA | 105 | I208C (ATC→TGC) | bcsE | conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (0/105); total (0/105) | |||||||||||
| * | W3110S.gb | 3,943,338 | 0 | T | A | 100.0% | 290.3 / NA | 105 | I208C (ATC→TGC) | bcsE | conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (0/105); total (0/105) | |||||||||||
Only 100 of 105 total aligned reads displayed.
TTTGAACTAATGTCCAGATACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGACC > W3110S.gb/3943320‑3943381 || gttGAACTAATGTCGAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1067793/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:417154/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:673403/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:668663/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:664595/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:659630/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:646148/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:619368/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:617009/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:587265/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:572864/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:509432/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:489109/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:458154/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:690983/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:395858/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:37574/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:366486/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:35152/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:34446/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:338854/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:334317/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:308090/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1001196/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:300090/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:847187/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:965365/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:95439/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:938392/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:923733/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:91795/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:891564/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:869623/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:866578/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:866200/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:850671/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:850021/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:302855/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:798008/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:797265/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:784900/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:773117/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:766613/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:765553/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:742886/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:73531/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:727846/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:726002/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1130623/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1334019/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:295168/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1300201/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1280049/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1269320/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1263807/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1210743/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1165926/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1160945/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1159662/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1159316/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1320973/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1116460/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:111539/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1069220/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:106451/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1047607/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1043283/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1039792/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1029842/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1024929/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1012536/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1003874/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1462379/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:214228/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:203009/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:224816/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:170021/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:167680/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:230663/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:237718/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1468098/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:245360/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1441314/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:282853/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1408408/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1398465/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1391959/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1367648/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1357827/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1351932/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1342299/61‑1 (MQ=255)gttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCAAAGCTGCTGACGGGCGCTGAcc < 1:661404/61‑1 (MQ=255)gttGAACTAATGTACAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGTGCGCTGAcc < 1:529693/61‑1 (MQ=255) ttGAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:197188/61‑1 (MQ=255) gAACTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1023749/59‑1 (MQ=255) aaCTAATGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:8671/58‑1 (MQ=255) aaTGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:1147908/54‑1 (MQ=255) aTGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:159131/53‑1 (MQ=255) aTGTCCAGCAACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:319049/53‑1 (MQ=255) aTGTCCAGCAACCATTATGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGAcc < 1:774822/53‑1 (MQ=255) || TTTGAACTAATGTCCAGATACCATTTTGTTGCTGAACGCTAAGCTGCTGACGGGCGCTGACC > W3110S.gb/3943320‑3943381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |