Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 1,620,068 | Δ1 bp | coding (555/666 nt) | marC ← | predicted transporter |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 1,620,066 | 0 | C | . | 100.0% | 42.6 / NA | 11 | coding (557/666 nt) | marC | predicted transporter |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (9/2); total (9/2) |
TACATACCAGCAGGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTGCCCACCAGCCGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCC > W3110S.gb/1620013‑1620108 | tacatacCAGCAGGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTG‑CCACCAGcc < 1:2482971/62‑1 (MQ=255) gcagGAATCCCATTAGACGGGAGATCGCTTCAATGCCACCCTTG‑CCACCAGCCGCATAATTg > 1:247083/1‑62 (MQ=255) gcagGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTG‑CCACCAGCCGCATAATTg > 1:1550328/1‑62 (MQ=255) gcagGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTG‑CCACCAGCCGCATAATTg > 1:2271456/1‑62 (MQ=255) gcagGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTG‑CCACCAGCCGCATAATTg > 1:2533404/1‑62 (MQ=255) gcagGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTG‑CCACCAGCCGCATAATTg > 1:2834605/1‑62 (MQ=255) gcagGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTG‑CCACCAGCCGCATAATTg > 1:2849815/1‑62 (MQ=255) gcagGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTG‑CCACCAGCCGCATAATTg > 1:564826/1‑62 (MQ=255) gcagGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTG‑CCACCAGCCGCATAATTg > 1:57516/1‑62 (MQ=255) gcagGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTG‑CCACCAGCCGCATAATTg > 1:99110/1‑62 (MQ=255) tCGCTTCAATGCCACCCTTG‑CCACCAGCCGCATAATTGCGCCGGAGCTGCGTAGGCTTcccc < 1:758228/62‑1 (MQ=255) | TACATACCAGCAGGAATCCCATCAGACGGGAGATCGCTTCAATGCCACCCTTGCCCACCAGCCGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCC > W3110S.gb/1620013‑1620108 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |