| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | W3110S.gb | 3,746,913 | Δ1,199 bp | [tnaB]–[tnaB] | [tnaB], insH, [tnaB] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 3746913–3748110 | 3748111 | 2–1199 | 37 [0] | [0] 37 | [tnaB]–[tnaB] | [tnaB],insH,[tnaB] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3746912 | 0 (0.000) | 37 (1.410) | 5/100 | 0.2 | 100% | coding (71/447 nt) | tnaB | tryptophan transporter of low affinity |
| ? | W3110S.gb | 3748112 = | 0 (0.000) | coding (871/984 nt) | tnaB | tryptophan transporter of low affinity | |||||
CGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3746862‑3746912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > W3110S.gb/3748112‑3748153 aGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAG < 1:712121/60‑1CGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAG < 1:153421/61‑1 CAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGG > 1:491746/1‑61 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:772731/47‑1 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:590145/47‑1 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:371053/47‑1 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:3033725/47‑1 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:2795775/47‑1 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:2715470/47‑1 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:2697470/47‑1 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:1639923/47‑1 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:1854534/47‑1 AAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:958212/46‑1 AAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:2210237/46‑1 CGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAA < 1:1000712/41‑1 GAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCag > 1:2473559/1‑57 GAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTG > 1:1512052/1‑59 GAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTG > 1:3060034/1‑59 GAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTG > 1:3030158/1‑59 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:1826981/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:1469332/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:153901/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:2918041/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:2910344/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:1647784/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:2793906/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:1858654/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:2644743/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:75998/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:2268812/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:833099/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:2075590/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTG > 1:1302822/1‑61 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTG > 1:2191407/1‑61 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCT > 1:2594357/1‑56 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTCCTGTTTGG > 1:2271890/1‑62 ACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGA > 1:2193045/1‑44 CGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3746862‑3746912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > W3110S.gb/3748112‑3748153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |