Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1964666	1964667	2	8 [0]	[1] 5	flhE	flagellar protein

CCTACACTACTTGCCTGCCACATCCCCTCCCCGGCGGCTTGCACCAGCAGCGGAAACAATAA  >  W3110S.gb/1964604‑1964665                                                              | ccTACACTACTTGCCTTCCACATCCCCTCCCCGGCGGCTTGCACCAGCAGCGGAAACaataa  <  1:1839814/62‑1 (MQ=255) ccTACACTACTTGCCTGCCACATCCCCTCCCCGGCGGCTTGCACCAGCAGCGGAAACaataa  <  1:1078599/62‑1 (MQ=255) ccTACACTACTTGCCTGCCACATCCCCTCCCCGGCGGCTTGCACCAGCAGCGGAAACaataa  <  1:3002271/62‑1 (MQ=255) ccTACACTACTTGCCTGCCACATCCCCTCCCCGGCGGCTTGCACCAGCAGCGGAAACaataa  <  1:3066588/62‑1 (MQ=255) ccTACACTACTTGCCTGCCACATCCCCTCCCCGGCGGCTTGCACCAGCAGCGGAAACaataa  <  1:535331/62‑1 (MQ=255) ccTACACTACTTGCCTGCCACATCCCCTCCCCGGCGGCTTGCACCAGCAGCGGAAACaataa  <  1:614631/62‑1 (MQ=255) ccTACACTACTTGCCTGCCACATCCCCTCCCCGGCGGCTTGCACCAGCAGCGGAAACaataa  <  1:805355/62‑1 (MQ=255)       ctactTGCCTGCCACATCCCCTCCCCGGCGGCTTGCACCAGCAGCGGAAACaataa  >  1:3137307/1‑56 (MQ=255)                                                              | CCTACACTACTTGCCTGCCACATCCCCTCCCCGGCGGCTTGCACCAGCAGCGGAAACAATAA  >  W3110S.gb/1964604‑1964665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑