Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3308827	3308865	39	8 [0]	[1] 3	nlpI/pnp	conserved hypothetical protein/polynucleotide phosphorylase/polyadenylase

GGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTT  >  W3110S.gb/3308772‑3308826                                                       | ggCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGtt  >  1:1466200/1‑55 (MQ=255) ggCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGtt  >  1:1999404/1‑55 (MQ=255) ggCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGtt  >  1:2108939/1‑55 (MQ=255) ggCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGtt  >  1:2304293/1‑55 (MQ=255) ggCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGtt  >  1:2649201/1‑55 (MQ=255) ggCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGtt  >  1:2823558/1‑55 (MQ=255) ggCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGtt  >  1:2830903/1‑55 (MQ=255) ggCTTCATTTCCCACTCCCGAAGACAACGGTTGAATGAACGTCCTGTTCCCGGtt  >  1:98269/1‑55 (MQ=255)                                                       | GGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTT  >  W3110S.gb/3308772‑3308826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑