Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1190584	1190596	13	3 [0]	[0] 5	phoQ	sensory histidine kinase in two‑compoent regulatory system with PhoP

TTCGTACCAGACTGGTCAGTTCTCGCGTTGTGGCTGGATTG  >  W3110S.gb/1190597‑1190637 |                                         ttCGTACCAGACTGGTCAGTTCTCGCGTTGTGGCTGGATTg  <  1:1012820/41‑1 (MQ=255) ttCGTACCAGACTGGTCAGTTCTCGCGTTGTGGCTGGATTg  <  1:1241243/41‑1 (MQ=255) ttCGTACCAGACTGGTCAGTTCTCGCGTTGTGGCTGGATTg  <  1:1354374/41‑1 (MQ=255) ttCGTACCAGACTGGTCAGTTCTCGCGTTGTGGCTGGATTg  <  1:1473538/41‑1 (MQ=255) ttCGTACCAGACTGGTCAGTTCTCGCGTTGTGGCTGGATTg  <  1:2336755/41‑1 (MQ=255) |                                         TTCGTACCAGACTGGTCAGTTCTCGCGTTGTGGCTGGATTG  >  W3110S.gb/1190597‑1190637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑