Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1245487	1245499	13	3 [1]	[0] 7	ycgR	protein involved in flagellar function

TCATTCTTGCCATCAATCACTTTGCGCTCGCTGATGGAGATTAACTGGGCGTCAAAGTGAAA  >  W3110S.gb/1245500‑1245561 |                                                              tCATTCTTGCCATCAATCACTTTGCGCTCGCTGATGGAGATTAACTGGGCGTc           >  1:3033872/1‑53 (MQ=255) tCATTCTTGCCATCAATCACTTTGCGCTCGCTGATGGAGATTAACTGGGCGTCGAAGTGaaa  >  1:112314/1‑62 (MQ=255) tCATTCTTGCCATCAATCACTTTGCGCTCGCTGATGGAGATTAACTGGGCGTCAAAGTGaaa  >  1:1888646/1‑62 (MQ=255) tCATTCTTGCCATCAATCACTTTGCGCTCGCTGATGGAGATTAACTGGGCGTCAAAGTGaaa  >  1:2019684/1‑62 (MQ=255) tCATTCTTGCCATCAATCACTTTGCGCTCGCTGATGGAGATTAACTGGGCGTCAAAGTGaaa  >  1:2675767/1‑62 (MQ=255) tCATTCTTGCCATCAATCACTTTGCGCTCGCTGATGGAGATTAACTGGGCGTCAAAGTGaaa  >  1:638003/1‑62 (MQ=255) tCATTCTTGCCATCAATCACTTTGCGATCGCTGATGGAGATTAACTGGGCGTCAAAGTGaaa  >  1:577184/1‑62 (MQ=255) |                                                              TCATTCTTGCCATCAATCACTTTGCGCTCGCTGATGGAGATTAACTGGGCGTCAAAGTGAAA  >  W3110S.gb/1245500‑1245561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑