Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 4,269,085 G→A D394N (GAC→AAC)  dnaB → replicative DNA helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb4,269,0850GA77.8% 29.1 / 5.6 18D394N (GAC→AAC) dnaBreplicative DNA helicase
Reads supporting (aligned to +/- strand):  ref base G (0/4);  new base A (0/14);  total (0/18)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGCGCTGTCCCAGTTGAACCGTTCTCTGGAACAACGTGCCGACAAACGCCCGGTCAACTCCGACCTGCGTGAATCTGGCTCTAT  >  W3110S.gb/4269045‑4269128
                                        |                                           
ggCGCTGTCCCAGTTGAACCGTTCTCTGGAACAACGTGCCGACAAACGCCCGGTCAACTcc                         <  1:1232897/61‑1 (MQ=255)
ggCGCTGTCCCAGTTGAACCGTTCTCTGGAACAACGTGCCGACAAACGCCCGGTCAACTcc                         <  1:1798107/61‑1 (MQ=255)
ggCGCTGTCCCAGTTGAACCGTTCTCTGGAACAACGTGCCGACAAACGCCCGGTCAACTcc                         <  1:218905/61‑1 (MQ=255)
ggCGCTGGCCCAGTTGAACCGTTCTCTGGAACAACGTGCCGACAAACGCCCGGTCAACTcc                         <  1:2718774/61‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:967102/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:1156263/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:940666/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:29036/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:2702613/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:2657334/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:2481426/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:2072536/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:2059971/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:2057201/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:1857772/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:1537191/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:1452226/59‑1 (MQ=255)
                      tcgctGGAACAACGCCCCAACAAACGTCCCGTGATGTCCGACCTGCGTGAATCCGGCGCTAt  <  1:1339546/59‑1 (MQ=255)
                                        |                                           
GGCGCTGTCCCAGTTGAACCGTTCTCTGGAACAACGTGCCGACAAACGCCCGGTCAACTCCGACCTGCGTGAATCTGGCTCTAT  >  W3110S.gb/4269045‑4269128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: