Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 4,302,518 A→G R110R (CGT→CGC fdhF ← formate dehydrogenase‑H, selenopolypeptide subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb4,302,5180AG80.0% 14.6 / ‑0.5 10R110R (CGT→CGCfdhFformate dehydrogenase‑H, selenopolypeptide subunit
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (0/8);  total (1/9)
Fisher's exact test for biased strand distribution p-value = 2.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.38e-01

CGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGA  >  W3110S.gb/4302476‑4302540
                                          |                      
cgcAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCt     <  1:1226355/62‑1 (MQ=255)
               tACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGa  >  1:356086/1‑50 (MQ=255)
                  aTAGTTGGTTTCGTTACCCGTACCGCGCGAGGAGCCGGTCGTCTGGa  <  1:1589162/47‑1 (MQ=255)
                  aTAGTTGGTTTCGTTACCCGTACCGCGCGAGGAGCCGGTCGTCTGGa  <  1:2612313/47‑1 (MQ=255)
                  aTAGTTGGTTTCGTTACCCGTACCGCGCGAGGAGCCGGTCGTCTGGa  <  1:2946410/47‑1 (MQ=255)
                  aTAGTTGGTTTCGTTACCCGTACCGCGCGAGGAGCCGGTCGTCTGGa  <  1:2952312/47‑1 (MQ=255)
                  aTAGTTGGTTTCGTTACCCGTACCGCGCGAGGAGCCGGTCGTCTGGa  <  1:385429/47‑1 (MQ=255)
                  aTAGTTGGTTTCGTTACCCGTACCGCGCGAGGAGCCGGTCGTCTGGa  <  1:819568/47‑1 (MQ=255)
                      ttGGTTTCGTTACCCGTACCGCGCGAGGAGCCGGTCGTCTGGa  <  1:1978482/43‑1 (MQ=255)
                            tCGTTACCCGTACCGCGCGAGGAGCCGGTCGTCTGGa  <  1:2652336/37‑1 (MQ=255)
                                          |                      
CGCAAATTTTTGCATTACATAGTTGGTTTCGTTACCCGTACCACGCGAGGAGCCGGTCGTCTGGA  >  W3110S.gb/4302476‑4302540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: