Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 4,457,723 G→C G156G (GGG→GGC ytfT → predicted sugar transporter subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb4,457,7230GC92.9% 39.5 / ‑3.3 14G156G (GGG→GGCytfTpredicted sugar transporter subunit
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (0/13);  total (0/14)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGTCGCCGGGCGCGGCGTGGCGCAACTGATCACCGCCGGGCAGATCGTCACGTTTAACTCGCCGGATCTCTCATG  >  W3110S.gb/4457684‑4457758
                                       |                                   
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:1199813/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:1365100/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:1587618/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:1718100/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:20525/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:2129718/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:2143036/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:2655365/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:2708432/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:2708737/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:2895941/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCTGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:839165/51‑1 (MQ=255)
ggTGGCGGGCCGCGGCCGGGCGCAGTTGCTGACCGACGGCCAGATCGTCAc                          <  1:772625/51‑1 (MQ=255)
              gcgTGGCGCAACTGATCACCGCCGGGCAGATCGTCACGTTTAACTCGCCGGATCTCTCATg  <  1:2390815/61‑1 (MQ=255)
                                       |                                   
GGTCGCCGGGCGCGGCGTGGCGCAACTGATCACCGCCGGGCAGATCGTCACGTTTAACTCGCCGGATCTCTCATG  >  W3110S.gb/4457684‑4457758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: