Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 1,614,569 C→A A133S (GCA→TCA)  yneH ← predicted glutaminase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb1,614,5690CA81.2% 22.7 / 4.5 16A133S (GCA→TCA) yneHpredicted glutaminase
Reads supporting (aligned to +/- strand):  ref base C (3/0);  new base A (13/0);  total (16/0)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01

CACCGCTTAAGCCGCGCACGACTTCCAGCATACGTTGCCGTGGTGCGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAC  >  W3110S.gb/1614524‑1614610
                                             |                                         
cacCGCTTAAGCCGCGCACGACTTCCAGCATACGTTGCCGTGGTGCGCtt                                       >  1:1500444/1‑50 (MQ=255)
cacCGCTTAAGCCGCGCACGACTTCCAGCATACGTTGCCGTGGTGCGCtt                                       >  1:2563472/1‑50 (MQ=255)
cacCGCTTAAGCCGCGCACGACTTCCAGCATACGTTGCCGTGGTGCGCtt                                       >  1:2593356/1‑50 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGCCCACCAGCGCAc  >  1:419208/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCa   >  1:1534155/1‑61 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:1096016/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:1199249/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:1418464/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:2048515/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:2139864/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:2150564/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:2312825/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:2346821/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:283124/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:431678/1‑62 (MQ=255)
                         cAGCATACGTTGCCGTGGTGAGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAc  >  1:631119/1‑62 (MQ=255)
                                             |                                         
CACCGCTTAAGCCGCGCACGACTTCCAGCATACGTTGCCGTGGTGCGCTTAATCGCCCTTGCAACATATCGCAGACCACCAGCGCAC  >  W3110S.gb/1614524‑1614610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: