Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 1,659,538 C→T A87V (GCT→GTT)  ynfD → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb1,659,5380CT100.0% 50.3 / NA 17A87V (GCT→GTT) ynfDhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (11/6);  total (11/6)

GCATAAAATTCTCTATACCCGCACCACCAGCGGTAACGTCTCTGCTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGA  >  W3110S.gb/1659494‑1659595
                                            |                                                         
gCATAAAATTCTCTATACCCGCACCACCAGCGGTAACGTCTCTGTTCCCGCGCAGTCTAGcc                                          >  1:2431759/1‑62 (MQ=255)
gCATAAAATTCTCTATACCCGCACCACCAGCGGTAACGTCTCTGTTCCCGCGCAGTCTAGc                                           >  1:996618/1‑61 (MQ=255)
                           caGCGGTAACGTCTCTGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCTAACCGCAGt               <  1:411568/62‑1 (MQ=255)
                           caGCGGTAACGTCTCTGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGt               <  1:1657963/62‑1 (MQ=255)
                           caGCGGTAACGTCTCTGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGt               <  1:1918837/62‑1 (MQ=255)
                                gTAACGTCTCTGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGt               <  1:3095266/57‑1 (MQ=255)
                                gTAACGTCTCTGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAacac          <  1:2472053/62‑1 (MQ=255)
                                 tAACGTCTCTGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAacac          <  1:1610665/61‑1 (MQ=255)
                                         ctGTTCCCGCGCAGTCTAGGCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGa  >  1:2973515/1‑61 (MQ=255)
                                         ctGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGa  >  1:2477692/1‑61 (MQ=255)
                                         ctGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGa  >  1:98526/1‑61 (MQ=255)
                                         ctGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGa  >  1:321042/1‑61 (MQ=255)
                                         ctGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGa  >  1:2603342/1‑61 (MQ=255)
                                         ctGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGa  >  1:255281/1‑61 (MQ=255)
                                         ctGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGa  >  1:2423677/1‑61 (MQ=255)
                                         ctGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGa  >  1:2216334/1‑61 (MQ=255)
                                         ctGTTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGa  >  1:1653155/1‑61 (MQ=255)
                                            |                                                         
GCATAAAATTCTCTATACCCGCACCACCAGCGGTAACGTCTCTGCTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAACACATTATCGA  >  W3110S.gb/1659494‑1659595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: