Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 2,015,653 C→A R96R (CGC→CGA fliF → flagellar basal‑body MS‑ring and collar protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb2,015,6530CA100.0% 48.5 / NA 17R96R (CGC→CGAfliFflagellar basal‑body MS‑ring and collar protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (15/2);  total (15/2)

CGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGC  >  W3110S.gb/2015622‑2015702
                               |                                                 
cGGCAGATAAAGTTCACGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAggcggc                     >  1:1937240/1‑62 (MQ=255)
      aTAAAGTTCACGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGcggtc               <  1:1259056/62‑1 (MQ=255)
      aTAAAGTTCACGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGcggtc               <  1:193711/62‑1 (MQ=255)
               aCGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGa       >  1:91519/1‑61 (MQ=255)
               aCGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGa       >  1:742992/1‑61 (MQ=255)
               aCGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGa       >  1:435727/1‑61 (MQ=255)
               aCGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGa       >  1:3131642/1‑61 (MQ=255)
               aCGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGa       >  1:2447412/1‑61 (MQ=255)
               aCGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGa       >  1:241504/1‑61 (MQ=255)
               aCGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGa       >  1:1785994/1‑61 (MQ=255)
               aCGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGa       >  1:1781944/1‑61 (MQ=255)
               aCGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGa       >  1:163810/1‑61 (MQ=255)
               aCGAACTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGa       >  1:1423825/1‑61 (MQ=255)
                   aCTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTgg  >  1:486324/1‑61 (MQ=255)
                   aCTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGc  >  1:2649283/1‑62 (MQ=255)
                   aCTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGc  >  1:1715553/1‑62 (MQ=255)
                   aCTGCGTCTGCGACTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGc  >  1:1507712/1‑62 (MQ=255)
                               |                                                 
CGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGC  >  W3110S.gb/2015622‑2015702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: