Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 2,032,239 A→T A188A (GCA→GCT yedA → predicted inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb2,032,2390AT75.0% 15.6 / 3.5 12A188A (GCA→GCTyedApredicted inner membrane protein
Reads supporting (aligned to +/- strand):  ref base A (2/1);  new base T (9/0);  total (11/1)
Fisher's exact test for biased strand distribution p-value = 2.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.01e-01

TTACCTGTAGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCAGGCGTGGTGTTAATGATCGCGTCG  >  W3110S.gb/2032195‑2032263
                                            |                        
ttacctGTAGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCAGGCGTGGTGTTAATGAt         >  1:1703983/1‑62 (MQ=255)
ttaccgGTAGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCAGGCGTGGTGTTAATGAt         >  1:1799812/1‑62 (MQ=255)
     tGTAGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCAGGCGTGGTGTTAATGATCGCGt    <  1:2658639/62‑1 (MQ=255)
        aGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCTGGc                       >  1:1214222/1‑40 (MQ=255)
        aGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCTGGCGTGGTGTTAATGATCGCGTCg  >  1:1609888/1‑61 (MQ=255)
        aGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCTGGCGTGGTGTTAATGATCGCGTCg  >  1:1656333/1‑61 (MQ=255)
        aGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCTGGCGTGGTGTTAATGATCGCGTCg  >  1:1682514/1‑61 (MQ=255)
        aGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCTGGCGTGGTGTTAATGATCGCGTCg  >  1:2205518/1‑61 (MQ=255)
        aGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCTGGCGTGGTGTTAATGATCGCGTCg  >  1:2466785/1‑61 (MQ=255)
        aGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCTGGCGTGGTGTTAATGATCGCGTCg  >  1:2485275/1‑61 (MQ=255)
        aGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCTGGCGTGGTGTTAATGATCGCGTCg  >  1:916546/1‑61 (MQ=255)
        aGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCTGGCGTGGTGTTAATGATCGCGACg  >  1:884637/1‑61 (MQ=255)
                                            |                        
TTACCTGTAGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCAGGCGTGGTGTTAATGATCGCGTCG  >  W3110S.gb/2032195‑2032263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: