| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 2,208,604 | T→C | V225V (GTT→GTC) | yehL → | predicted transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 2,208,604 | 0 | T | C | 87.0% | 118.4 / 7.6 | 46 | V225V (GTT→GTC) | yehL | predicted transporter subunit |
| Reads supporting (aligned to +/- strand): ref base T (6/0); new base C (40/0); total (46/0) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGATCGCGGCGTCAATGAAATGAGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGTTTTTCCGATTATGGATTTCGCCCAGGAGTTGG > W3110S.gb/2208544‑2208635 | cgATCGCGGCGTCAATGAAATGAGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGttt < 1:990157/62‑1 (MQ=255)cgATCGCGGCGTCAATGAAATGAGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGttt < 1:2826358/62‑1 (MQ=255)cgATCGCGGCGTCAATGAAATGAGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGttt < 1:2680262/62‑1 (MQ=255)cgATCGCGGCGTCAATGAAATGAGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGttt < 1:632788/62‑1 (MQ=255) gATCGCGGCGTCAATGAAATGAGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGttt < 1:1889160/61‑1 (MQ=255) tgaGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGTTTTTCCGATTa > 1:1339242/1‑51 (MQ=255) tgaGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGTTTTTCCGATTATGGATTTCg > 1:1017350/1‑60 (MQ=255) tgaGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGTTTTTCCGATTATGGATTTCg > 1:1993570/1‑60 (MQ=255) tgaGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGTTTTTCCGATTATGGATTTCg > 1:2396507/1‑60 (MQ=255) tgaGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGTTTTTCCGATTATGGATTTCg > 1:2251130/1‑60 (MQ=255) tgaGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGTTTTTCCGATTATGGATTTCg > 1:2339313/1‑60 (MQ=255) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTc > 1:2656996/1‑36 (MQ=255) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTc > 1:985402/1‑36 (MQ=255) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAgct > 1:2397641/1‑45 (MQ=255) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:395810/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2540743/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2905239/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2953371/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:3050393/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:334917/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:367589/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:957454/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:553420/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:684169/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:685455/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:699042/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:752707/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:799556/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:860991/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:924642/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2124127/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:1266094/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:1545842/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:158365/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:1600536/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:1768400/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:1796579/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:181571/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2016077/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2041489/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2793098/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2251459/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2287068/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2369525/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2531887/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTgg > 1:2754374/1‑49 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTg > 1:2133963/1‑48 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTg > 1:461007/1‑48 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTATGGATTTCGCCCAGGAGCTg > 1:1379311/1‑48 (MQ=38) ttCGATTTTGAAACTGTCTTTCCGATTAAGGATTTCGCCCAGGAGCTgg > 1:2765893/1‑49 (MQ=37) ttCGATTTTGAAACTGTCTTT‑CGATTATGGATTTCGCCCAGGAGCTgg > 1:2308705/1‑48 (MQ=25) | CGATCGCGGCGTCAATGAAATGAGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGTTTTTCCGATTATGGATTTCGCCCAGGAGTTGG > W3110S.gb/2208544‑2208635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |