| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 2,783,860 | (A)8→7 | intergenic (‑193/+558) | ypjC ← / ← ileY | hypothetical protein/tRNA‑Ile |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 2,783,853 | 0 | A | . | 100.0% | 15.9 / NA | 5 | intergenic (‑186/+565) | ypjC/ileY | hypothetical protein/tRNA‑Ile |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (3/2); total (3/2) | |||||||||||
TATTTCGCTGTATGATAAAAAAAACCGTTATAATTTATTAGTGAAAATCGTTTTTCAAGTGTTAGAAATT > W3110S.gb/2783837‑2783906 | tATTTCGCTGTATGAT‑AAAAAAACCGTTATAATTTATTAGTGAAAATCGTTTTTCAAGTGtt < 1:665854/62‑1 (MQ=255)tATTTCGCTGTATGAT‑AAAAAAACCGTTATAATTTATTAGTGAAAATCGTTTTTCAAGTGtt < 1:830357/62‑1 (MQ=255) tGTATGAT‑AAAAAAACCGTTATAATTTATTAGTGAAAATCGTTTTTCAAGTGTTAGAAAtt > 1:1027044/1‑61 (MQ=255) tGTATGAT‑AAAAAAACCGTTATAATTTATTAGTGAAAATCGTTTTTCAAGTGTTAGAAAtt > 1:2301101/1‑61 (MQ=255) tGTATGAT‑AAAAAAACCGTTATAATTTATTAGTGAAAATCGTTTTTCAAGTGTTAGAAAtt > 1:432269/1‑61 (MQ=255) | TATTTCGCTGTATGATAAAAAAAACCGTTATAATTTATTAGTGAAAATCGTTTTTCAAGTGTTAGAAATT > W3110S.gb/2783837‑2783906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |