| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2756436 | 13 (0.400) | 7 (0.240) +TTATTT |
3/100 | 0.1 | 7.9% | coding (821/957 nt) | yfjH | hypothetical protein |
| ? | W3110S.gb | 4484645 = | 169 (5.230) | coding (234/1197 nt) | yjgN | conserved inner membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TATTTTTTATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/2756424‑2756436‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTTTTTTTTGTTTTTTT > W3110S.gb/4484645‑4484662 |||||| TATTTTTTATTTTTTATTTTCTTTTTTTTTTTTTTTT < 1:116546/37‑1TATTTTTTATTTTTTATTTTCTTTTTTTTTTTTTTT < 1:1145161/36‑1TATTTTTTATTTTTTATTTTCTTTTTTTTTTTTTTT < 1:1214649/36‑1TATTTTTTATTTTTTATTTTCTTTTTTTTTTTTTTT < 1:1277219/36‑1TATTTTTTATTTTTTATTTTCTTTTTTTTTTTTTTT < 1:2224231/36‑1TATTTTTTATTTTTTATTTTCTTTTTTTTTTTTTTT < 1:2682192/36‑1TATTTTTTATTTTTTATTTTCTTTTTTTTTTTTTT < 1:1171281/35‑1 |||||| TATTTTTTATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/2756424‑2756436‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTTTTTTTTGTTTTTTT > W3110S.gb/4484645‑4484662 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |