Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1975035	1975057	23	33 [1]	[0] 13	[cheW]	[cheW]

CACCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTACATTCGTCA  >  W3110S.gb/1974978‑1975043                                                         |          caCCAAGGGTAAATACCAGAAATTCCTGGCTTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1004013/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCTCTGGCCAGCTTTGTTa           <  1:604477/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1252406/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:858306/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:696576/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:695053/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:612159/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:36978/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:341468/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:2880065/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:2795161/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:275655/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:2648943/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:2644552/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:2606298/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:2103840/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:2088739/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:2046982/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1839841/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1711594/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:2205165/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1601416/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1598684/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1549499/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1561615/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTGGTTa           <  1:2444728/57‑1 (MQ=255) caCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCCCTGGCCAGCTTTGTTa           <  1:2246569/57‑1 (MQ=255)  aCCAAGGGTAAATACCAGAAATTCGTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1310383/56‑1 (MQ=255)  aCCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:2922715/56‑1 (MQ=255)     aaGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTACATTCGTCa  >  1:505556/1‑62 (MQ=255)            aaTACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1340865/46‑1 (MQ=255)            aaTACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1988523/46‑1 (MQ=255)            aaTACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTa           <  1:1299727/46‑1 (MQ=255)                                                         |          CACCAAGGGTAAATACCAGAAATTCCTGGCCTGACGGCTCGCTGGCCAGCTTTGTTACATTCGTCA  >  W3110S.gb/1974978‑1975043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑