Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2007966	2007977	12	28 [0]	[0] 35	fliT	predicted chaperone

GCCAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGC  >  W3110S.gb/2007902‑2007965                                                                | gCCAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCG‑‑AGCGAAATGGc  <  1:864346/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:2861788/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:998223/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:993534/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:967705/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:898140/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:70053/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:692558/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:594543/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:575636/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:1118338/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:2564868/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:2484571/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:2246466/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:2184112/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:1741116/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:1683515/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:1654564/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:1626442/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:1620575/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:1418577/62‑1 (MQ=255)   cAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:1228916/62‑1 (MQ=255)    atcTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:741512/59‑1 (MQ=255)    aGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:413712/61‑1 (MQ=255)    aGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:473322/61‑1 (MQ=255)    aGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:673027/61‑1 (MQ=255)    aGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:1463221/61‑1 (MQ=255)     gCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGc  <  1:2301231/60‑1 (MQ=255)                                                                | GCCAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGC  >  W3110S.gb/2007902‑2007965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑