Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2025928	2025937	10	10 [0]	[0] 12	fliR/rcsA	flagellar export pore protein/DNA‑binding transcriptional co‑regulator with RcsB

TACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCG  >  W3110S.gb/2025866‑2025927                                                              | ttcGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCg  <  1:2792535/60‑1 (MQ=255) tACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCg  <  1:1310401/62‑1 (MQ=255) tACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCg  <  1:1336392/62‑1 (MQ=255) tACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCg  <  1:1372544/62‑1 (MQ=255) tACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCg  <  1:1785803/62‑1 (MQ=255) tACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCg  <  1:2121531/62‑1 (MQ=255) tACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCg  <  1:2162491/62‑1 (MQ=255) tACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCg  <  1:2887854/62‑1 (MQ=255) tACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCg  <  1:593323/62‑1 (MQ=255) tACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCg  <  1:855283/62‑1 (MQ=255)                                                              | TACGAACATCTTCCAGGATACTCCTGCAGCGAAATATTTGTTTTAAGCTCACTCACATATCG  >  W3110S.gb/2025866‑2025927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑