Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2486799	2486821	23	25 [0]	[0] 7	emrY	predicted multidrug efflux system

CATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATG  >  W3110S.gb/2486738‑2486798                                                             | cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:2102983/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:923060/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:912883/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:72618/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:656333/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:523290/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:431640/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:272019/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:2418529/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:2345389/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:2315287/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:2197673/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:2170984/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:1036148/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:2090542/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:2038207/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:2031524/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:2014769/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:1912772/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:1886771/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:1761190/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:1635209/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:137499/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:1197923/1‑61 (MQ=255) cATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATg  >  1:11950/1‑61 (MQ=255)                                                             | CATAAGGACGATCGCTCCAGAGTAAAATAAATACGCGCATGTGATACTCACAATACCAATG  >  W3110S.gb/2486738‑2486798

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑