Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2666751	2666766	16	27 [0]	[0] 3	hcaR	DNA‑binding transcriptional regulator

TGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCA  >  W3110S.gb/2666690‑2666750                                                             | tGCAGAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:2400779/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCGTCa  <  1:2202951/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1012900/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:940842/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:554210/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:539999/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:2707537/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:2560476/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:2454541/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:2296323/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:2245933/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:2030704/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1968071/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1796989/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1751551/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1734726/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1572598/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1437477/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1406119/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1371255/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1349712/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1192698/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1192282/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:111870/61‑1 (MQ=255) tGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1075911/61‑1 (MQ=255)  gCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:1820672/60‑1 (MQ=255)               gAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCa  <  1:97356/47‑1 (MQ=255)                                                             | TGCACAATGGCGATGAAATCGCGTAATGCCGGCTTCATCTCCCCTTTCTTCCACGCCATCA  >  W3110S.gb/2666690‑2666750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑