Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2687321	2687342	22	48 [0]	[0] 23	yfhA	predicted DNA‑binding response regulator in two‑component system

CAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTCGC  >  W3110S.gb/2687259‑2687320                                                              | cAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1275592/62‑1 (MQ=255) cAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2570301/62‑1 (MQ=255) cAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:695480/62‑1 (MQ=255) cAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2828859/62‑1 (MQ=255) cAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1617562/62‑1 (MQ=255) cAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:378354/62‑1 (MQ=255) cAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1897257/62‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:255240/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1120032/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2574992/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2637978/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2688544/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2703492/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2863175/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2866664/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:328381/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:329424/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:342248/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:434568/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:54135/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:744116/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:783740/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:852642/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:886752/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:939202/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2518392/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1042162/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1278715/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1315328/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:145663/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1468658/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1527636/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1560665/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1598292/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:1897064/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:203639/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:204294/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2073135/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2151582/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2210548/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2260740/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2297147/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2363182/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2437925/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2499668/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:2537488/52‑1 (MQ=255)           ccGTCCATTTCATCCATCCGCAGGTCCCTGATGACTAAATCTACTTTTTcgc  <  1:2365880/52‑1 (MQ=255)            cGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTcgc  <  1:989797/51‑1 (MQ=255)                                                              | CAGCTGCATACCGTCCATTTCATCCATCCGCAGGTCGCTGATGACTAAATCTACTTTTTCGC  >  W3110S.gb/2687259‑2687320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑