Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2821090	2821112	23	47 [0]	[0] 4	recX	regulatory protein for RecA

CAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCG  >  W3110S.gb/2821028‑2821089                                                              | cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:261072/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1928674/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1925188/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:173166/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1007439/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:2768166/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:2482631/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:669883/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:2689186/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:779387/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1382283/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1280394/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:117951/62‑1 (MQ=255) cAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1139638/62‑1 (MQ=255)  aGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:520713/61‑1 (MQ=255)     tCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:834895/58‑1 (MQ=255)         tAAGCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:674664/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:2617139/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:320769/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:3976/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:569089/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:417808/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:567856/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:2322806/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:584820/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:632544/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:717106/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:847927/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:899316/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1623512/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1052621/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1171291/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1331153/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1418108/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1444735/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1488247/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1534402/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1594287/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:2569393/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1722779/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1894796/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1904710/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1993463/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:2188660/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:2371671/54‑1 (MQ=255)         tAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:2519602/54‑1 (MQ=255)         tAACC‑TTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCg  <  1:1887926/53‑1 (MQ=255)                                                              | CAGGTCCATAACCTTTGCGGCTACGGCTGGCGATAAAGCGCGCAACAAATCGGCTGTCATCG  >  W3110S.gb/2821028‑2821089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑