Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2914620	2914652	33	25 [0]	[0] 27	barA	hybrid sensory histidine kinase, in two‑component regulatory system with UvrY

GGAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACG  >  W3110S.gb/2914573‑2914619                                               | ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:2304071/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:837862/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:709239/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:636634/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:515795/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:456939/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:422016/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:320305/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:2829707/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:2469274/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:2452287/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:2398832/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:1207278/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:2172986/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:2077335/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:1882135/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:1846673/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:1821997/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:1739223/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:1720173/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:1597250/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:1595106/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:1474692/47‑1 (MQ=255) ggAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:1467156/47‑1 (MQ=255)    aGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACg  <  1:2439158/44‑1 (MQ=255)                                               | GGAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACG  >  W3110S.gb/2914573‑2914619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑