Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2962467	2962493	27	25 [0]	[0] 8	ppdA	conserved hypothetical protein

CTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCC  >  W3110S.gb/2962406‑2962466                                                             | cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:2371744/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:974076/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:828030/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:548878/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:518673/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:453466/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:452939/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:337628/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:322015/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:2400871/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:1053423/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:2344787/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:2206215/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:2047758/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:2012337/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:2009778/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:1987409/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:1887841/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:175269/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:1657313/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:1622097/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:1417431/61‑1 (MQ=255) cTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGCTTTTGAAGCGAATATGcc  <  1:2577770/61‑1 (MQ=255)  ttCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:2842160/60‑1 (MQ=255)         cGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGcc  <  1:687702/53‑1 (MQ=255)                                                             | CTTCCCCACGGCGAAACCACCAGCCACCACTCGCCCGTTGAGTTTTTGAAGCGAATATGCC  >  W3110S.gb/2962406‑2962466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑