Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3157634	3157634	1	15 [0]	[0] 2	ygiQ	conserved hypothetical protein

ATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGG  >  W3110S.gb/3157576‑3157633                                                          | atatTTTTTAACGTCCACCCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:266150/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:1353311/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:1626447/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:2097427/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:2379041/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:2438557/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:2852210/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:2862273/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:2906917/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:47377/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:475335/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:677382/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:861300/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:884996/1‑58 (MQ=255) atatTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCgg  >  1:994134/1‑58 (MQ=255)                                                          | ATATTTTTTAACGTCCAACCGCCGCTTTAGGCCGTTTCTTCGCACCAGCATTCACCGG  >  W3110S.gb/3157576‑3157633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑