Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3157703	3157726	24	27 [0]	[1] 4	ygiQ	conserved hypothetical protein

TGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATG  >  W3110S.gb/3157641‑3157702                                                              | tGCGTAGATGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:1359164/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCTTATg  <  1:1728979/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2370099/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:804681/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:64032/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:4950/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:45794/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:374262/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2920806/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2390504/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:1077640/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2063452/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:1556956/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:1301258/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:1243292/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:1179821/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:1156246/62‑1 (MQ=255) tGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:1092037/62‑1 (MQ=255)  gCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2129220/61‑1 (MQ=255)  gCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2228056/61‑1 (MQ=255)  gCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2417772/61‑1 (MQ=255)  gCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2441152/61‑1 (MQ=255)  gCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2571962/61‑1 (MQ=255)  gCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2729692/61‑1 (MQ=255)  gCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:2916333/61‑1 (MQ=255)  gCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:756609/61‑1 (MQ=255)               tttttttGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATg  <  1:151549/48‑1 (MQ=255)                                                              | TGCGTAGACGACGCTTTTTTTGCCGTAGCAGGCGTCTGACGCTGGGTCGCCATCGGCGTATG  >  W3110S.gb/3157641‑3157702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑