Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3360377	3360456	80	16 [0]	[0] 9	gltD	glutamate synthase, 4Fe‑4S protein, small subunit

CATCATCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTG  >  W3110S.gb/3360315‑3360376                                                              | catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:1053085/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:1509320/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:1880719/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:1935936/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:2042953/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:2118453/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:2245012/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:2297237/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:2486340/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:2629001/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:327559/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:54795/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:584382/62‑1 (MQ=255) catcatCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:735151/62‑1 (MQ=255)  atcatcGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCAAAAATCTTTGCTg  <  1:1276570/61‑1 (MQ=255)      tcGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTg  <  1:487994/57‑1 (MQ=255)                                                              | CATCATCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTG  >  W3110S.gb/3360315‑3360376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑