Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3380839	3380882	44	31 [1]	[0] 11	degQ	serine endoprotease, periplasmic

AACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACC  >  W3110S.gb/3380777‑3380839                                                              |  aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2033963/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:794644/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:726872/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:718424/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:565211/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2882086/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2802520/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2751997/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2712770/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2647641/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2416251/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2410353/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2301927/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2255305/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2180204/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2047713/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:1041418/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:2006893/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:190835/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:1844919/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:1682125/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:1555350/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:151856/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:1505472/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:1447088/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:126277/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:1204930/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:1178022/62‑1 (MQ=255) aaCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGAGATGATTTAc   <  1:1633569/62‑1 (MQ=255)  aCGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAcc  <  1:1765724/62‑1 (MQ=255)    ggCCAGTCAGGGACAGAAAATCCCTGAAGAATTCAAAAAGTTTTTTGGTGATGATTTAc   <  1:1418405/59‑1 (MQ=255)                                                              |  AACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACC  >  W3110S.gb/3380777‑3380839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑