Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3496191	3496223	33	11 [0]	[0] 7	ptsA	fused predicted PTS enzymes Hpr component, enzyme I component, and enzyme IIA component

GGTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATCGC  >  W3110S.gb/3496149‑3496190                                          | ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:1483776/1‑42 (MQ=255) ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:1653936/1‑42 (MQ=255) ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:1877575/1‑42 (MQ=255) ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:188761/1‑42 (MQ=255) ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:2224267/1‑42 (MQ=255) ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:2358/1‑42 (MQ=255) ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:2406341/1‑42 (MQ=255) ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:2454475/1‑42 (MQ=255) ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:249035/1‑42 (MQ=255) ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:267095/1‑42 (MQ=255) ggTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATcgc  >  1:558436/1‑42 (MQ=255)                                          | GGTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATCGC  >  W3110S.gb/3496149‑3496190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑