Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3501334	3501424	91	27 [0]	[0] 2	katG	catalase/hydroperoxidase HPI(I)

CAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTG  >  W3110S.gb/3501272‑3501333                                                              | cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2328799/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:864250/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:857219/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:853672/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:809435/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:593795/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:493963/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:370909/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:293257/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2809331/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2735887/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2614804/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2357260/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:1121390/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2236246/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2235817/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2164374/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2037460/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2033994/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:1922693/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:1725048/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:1707041/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:1428246/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:1276564/62‑1 (MQ=255) cAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:1260853/62‑1 (MQ=255)  cgCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:2495587/60‑1 (MQ=255)   gcgcGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTg  <  1:128204/60‑1 (MQ=255)                                                              | CAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTG  >  W3110S.gb/3501272‑3501333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑