Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3639576	3639617	42	45 [0]	[0] 11	xerC	site‑specific tyrosine recombinase

GCGCGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAT  >  W3110S.gb/3639514‑3639575                                                              | gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2888049/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2249278/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2267632/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2270414/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:23149/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2417226/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2562788/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2565078/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2614328/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2641215/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2740850/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2871317/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2199209/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:631950/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:667500/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:686044/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:786618/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:789978/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:853532/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:859827/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:902087/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:909850/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:981474/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1527889/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1040239/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1092105/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1124519/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1169161/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1211838/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1220490/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1280822/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1350367/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1495714/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1508520/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:101008/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:160100/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1649487/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1705940/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1724417/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1758740/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1953568/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:1955233/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:203813/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2144027/1‑62 (MQ=255) gcgcGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAt  >  1:2177167/1‑62 (MQ=255)                                                              | GCGCGTGGATGCGCCGCATCGTACACCGAGGCAAGGTGTTGAAAATCAAGATGAGTATAGAT  >  W3110S.gb/3639514‑3639575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑