Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3738409	3738509	101	24 [0]	[0] 3	cbrC	conserved hypothetical protein

TCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACT  >  W3110S.gb/3738349‑3738408                                                            | tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATCCt  <  1:1151538/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:2161472/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:986156/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:739968/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:660596/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:580475/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:544316/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:311342/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:2711061/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:2568649/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:254242/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:2521189/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:2474337/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:2108561/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:2002538/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:1855686/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:1774115/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:1604900/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:1575441/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:1384057/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:1375982/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:1358456/60‑1 (MQ=255) tCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:1197016/60‑1 (MQ=255) tCAGCATTTCATCAGGATAAGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACt  <  1:1832216/60‑1 (MQ=255)                                                            | TCAGCATTTCATCAGGATATGTGTTCTTAATACCGGCAAATTCGTCCTCTTCATCATACT  >  W3110S.gb/3738349‑3738408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑