Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3867690	3867750	61	16 [0]	[0] 3	mtlA	fused mannitol‑specific PTS enzyme IIABC components

CAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAT  >  W3110S.gb/3867629‑3867689                                                             | cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGAGAGGGCTTCAACAATCGGGCCAAt  <  1:2280466/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:1566283/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:1770634/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:1826195/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:1829553/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:229618/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:2826708/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:315982/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:475830/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:668352/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:692019/61‑1 (MQ=255) cAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:70777/61‑1 (MQ=255) cAACCATGAAGTTAACGACCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:2431105/61‑1 (MQ=255)  aaCCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:2518219/60‑1 (MQ=255)          aGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:2369363/52‑1 (MQ=255)                 gCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAt  <  1:2829852/45‑1 (MQ=255)                                                             | CAACCATGAAGTTAACGCCCGCAGCCAGCATTTTGGACAGGGCTTCAACAATCGGGCCAAT  >  W3110S.gb/3867629‑3867689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑