Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3922021	3922065	45	26 [0]	[0] 5	yiaF	conserved hypothetical protein

AAATGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCA  >  W3110S.gb/3921960‑3922020                                                             | aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:2336740/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:92030/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:774064/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:721471/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:343578/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:291372/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:285443/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:2739304/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:2664420/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:2562911/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:252553/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:2450876/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:240338/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:1157763/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:2316522/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:227192/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:2238009/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:2185895/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:2126871/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:1903294/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:1828363/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:1714145/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:1511712/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:1483469/61‑1 (MQ=255) aaaTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:1199649/61‑1 (MQ=255)   aTGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCa  <  1:218040/59‑1 (MQ=255)                                                             | AAATGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCA  >  W3110S.gb/3921960‑3922020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑