Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4120152	4120164	13	45 [0]	[0] 19	hofQ	predicted fimbrial transporter

GCGGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAT  >  W3110S.gb/4120099‑4120151                                                     | gcgGGAGCACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:813328/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:453211/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2391263/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2532550/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2545096/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:256081/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2619903/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2680328/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2839530/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2875131/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2926502/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:385677/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:43517/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2381428/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:57484/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:580345/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:597141/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:651367/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:718372/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:78980/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:793643/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:877281/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:949552/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1964118/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1142504/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1164669/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:11848/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1294335/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1343074/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1356640/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1413071/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1492156/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1881341/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1950330/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:1106307/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2014251/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2023635/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2124657/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2125582/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2202497/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2224396/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2246779/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2254318/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2281823/1‑53 (MQ=255) gcgGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAt  >  1:2347228/1‑53 (MQ=255)                                                     | GCGGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTAT  >  W3110S.gb/4120099‑4120151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑