Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4121269	4121273	5	16 [0]	[0] 27	hofQ/aroK	predicted fimbrial transporter/shikimate kinase I

TTATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATC  >  W3110S.gb/4121207‑4121268                                                              | ttATTCAGTTGCCAAACCCGCTGGAGTATTGATATAATTTTCAGTCTGACTCTCGCAATATc  <  1:231863/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:1139727/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:1394294/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:1445131/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:1498133/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:1633757/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:1702352/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:1860657/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:229981/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:2565035/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:2824991/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:497622/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:815485/62‑1 (MQ=255) ttATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCCGACTCTCGCAATATc  <  1:2433723/62‑1 (MQ=255)  tATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:2703949/61‑1 (MQ=255)            ccAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATc  <  1:2196715/51‑1 (MQ=255)                                                              | TTATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATC  >  W3110S.gb/4121207‑4121268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑