Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4182309	4182374	66	35 [0]	[0] 17	gspD	general secretory pathway component, cryptic

CATCATCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCG  >  W3110S.gb/4182247‑4182308                                                              | catcatCGTTACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:572398/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACTGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1922259/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTATCGCGCTCg  <  1:158939/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2556844/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2183380/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2316803/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2321154/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2322855/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:237230/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2514281/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2541581/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2030784/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2584130/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2631616/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2826468/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:352952/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:387098/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:952601/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1836154/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1106861/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1126493/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1135810/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:137856/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:169958/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1713914/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1775115/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:212742/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1875358/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1910529/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1920777/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2021666/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1066123/62‑1 (MQ=255) catcatCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGGTTAGCGCGCTCg  <  1:1833498/62‑1 (MQ=255)                      tcgGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:2146302/41‑1 (MQ=255)                            ggaTAAATACCATCAGGTTGCGTTTAGCGCGCTCg  <  1:1970239/35‑1 (MQ=255)                                                              | CATCATCGTCACGGATAATCGTCGGACGGATAAATACCATCAGGTTGCGTTTAGCGCGCTCG  >  W3110S.gb/4182247‑4182308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑