Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4317387	4317395	9	15 [0]	[0] 11	rpiR	DNA‑binding transcriptional repressor

AAAGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGA  >  W3110S.gb/4317325‑4317386                                                              | aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:1235872/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:1331802/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:1434153/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:1843402/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:1953432/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:1983494/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:2044625/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:2513138/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:294267/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:406766/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:464967/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:623751/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:817043/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGa  <  1:944327/62‑1 (MQ=255) aaaGTGATGTTAAATACCTTATTCACCACATCCTGCGGAGATTCATCAAAAGACAACTCGGa  <  1:494692/62‑1 (MQ=255)                                                              | AAAGTGATGTTAAATACCTTATTCACCACATCCTGCGGCGCTTCATCAAAAGCCAACTCGGA  >  W3110S.gb/4317325‑4317386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑