Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4546881	4546905	25	2 [0]	[0] 6	fimE	tyrosine recombinase/inversion of on/off regulator of fimA

TGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGAC  >  W3110S.gb/4546819‑4546880                                                              | tGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGgaccttgac  >  1:1688629/1‑62 (MQ=255) tGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGgaccttgac  >  1:1825708/1‑62 (MQ=255)                                                              | TGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGAC  >  W3110S.gb/4546819‑4546880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑