Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4552522	4552533	12	7 [1]	[0] 22	fimF	minor component of type 1 fimbriae

TTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTC  >  W3110S.gb/4552460‑4552522                                                              |  ttGTGGCTGGCGGTGAGTCACG‑ATTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTc  >  1:2307994/1‑62 (MQ=255)  tgtgGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGt   <  1:107495/61‑1 (MQ=255)  tgtgGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGt   <  1:1269153/61‑1 (MQ=255)  tgtgGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGt   <  1:581747/61‑1 (MQ=255)  tgtgGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGt   <  1:958659/61‑1 (MQ=255)          gcGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGt   <  1:2586522/53‑1 (MQ=255)             gTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGt   <  1:2409160/50‑1 (MQ=255)                                                              |  TTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTC  >  W3110S.gb/4552460‑4552522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑