Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4565559	4565607	49	31 [0]	[0] 9	yjiH/kptA	conserved inner membrane protein/2'‑phosphotransferase

GAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAACC  >  W3110S.gb/4565497‑4565558                                                              | gAAAAATTACGCTGTGTGGAAAAGGCTCTGCTCAGGATTGAGTTTCAGAAAATTCATAAAcc  <  1:1637354/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2364674/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:988961/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:983434/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:84091/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:652546/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:551665/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:473904/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:441514/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:330492/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2873709/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2707053/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2632671/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2615134/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2611164/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:103594/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2223329/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2160780/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2093429/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:204664/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2032463/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:1705715/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:1704829/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:1478433/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:1432107/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:1425641/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:1281711/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:115503/62‑1 (MQ=255) gAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:1129430/62‑1 (MQ=255)    aaaTTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:2806587/59‑1 (MQ=255)       ttACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAAcc  <  1:767109/56‑1 (MQ=255)                                                              | GAAAAATTACGCTGTGTGGAAAAGGCTCTGCGCAGGATTGAGTTGCAGAAAATTCATAAACC  >  W3110S.gb/4565497‑4565558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑