Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4597272	4597318	47	9 [0]	[0] 3	tsr	methyl‑accepting chemotaxis protein I, serine sensor receptor

CTCTTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCAA  >  W3110S.gb/4597211‑4597271                                                             | ctctTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCaa  >  1:2072973/1‑61 (MQ=255) ctctTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCaa  >  1:2146415/1‑61 (MQ=255) ctctTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCaa  >  1:2304082/1‑61 (MQ=255) ctctTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCaa  >  1:2378329/1‑61 (MQ=255) ctctTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCaa  >  1:2518629/1‑61 (MQ=255) ctctTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCaa  >  1:2660541/1‑61 (MQ=255) ctctTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCaa  >  1:638310/1‑61 (MQ=255) ctctTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCaa  >  1:806452/1‑61 (MQ=255) ctctTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCaa  >  1:980926/1‑61 (MQ=255)                                                             | CTCTTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCAA  >  W3110S.gb/4597211‑4597271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑