Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	259271	259295	25	28 [1]	[0] 4	phoE	outer membrane phosphoporin protein E

TTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTACAGATG  >  W3110S.gb/259209‑259275                                                              |      ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:2497989/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:79804/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:607147/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:594930/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:500973/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:497285/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:461654/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:460593/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:347356/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:2890609/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:2849841/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:2735568/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:2545940/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:1098480/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:2380759/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:2240532/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:2224567/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:2156302/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:206715/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:1940982/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:1920519/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:1761948/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:169393/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:1661578/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:1418351/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:126795/62‑1 (MQ=255) ttAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAc       <  1:1100384/62‑1 (MQ=255)      tttGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTAcagatg  <  1:2629911/62‑1 (MQ=255)                                                              |      TTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTATTATATATTTCTGCAGCCTGTACAGATG  >  W3110S.gb/259209‑259275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑