Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	357892	357920	29	31 [0]	[0] 16	[cynR]	[cynR]

GGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAA  >  W3110S.gb/357830‑357891                                                              | gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2630540/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:878645/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:828874/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:814836/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:712451/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:697246/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:60060/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:489520/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2842448/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2827689/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2786997/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2762367/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2720598/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2636846/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2633895/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:1011509/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2438703/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2409846/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2328700/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2317783/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2069616/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2024592/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2006000/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:1632162/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:1548606/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:139351/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:13012/62‑1 (MQ=255) gggAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:1057327/62‑1 (MQ=255)  ggAGACGTGCAACGCACTGGCGGCACGGGTTAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2188408/61‑1 (MQ=255)      aCGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:365532/57‑1 (MQ=255)                    ggcggcACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa  <  1:2144082/43‑1 (MQ=255)                                                              | GGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAA  >  W3110S.gb/357830‑357891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑