Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	435474	435485	12	56 [0]	[0] 12	thiL	thiamin‑monophosphate kinase

TGATCAAACGTCATCTCCGTCCATCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATC  >  W3110S.gb/435414‑435473                                                            | tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:300097/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:101442/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2568813/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2580046/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2584326/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2587581/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2609385/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2639453/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:266660/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2713112/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2730910/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2812070/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2902938/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:290582/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2455477/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:308847/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:35011/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:360457/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:374454/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:411701/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:597269/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:648709/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:667130/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:744131/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:747829/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:790024/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:827242/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:895174/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1857444/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1065387/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1079386/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1107541/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1260380/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:128609/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1347648/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1515322/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1522256/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1602302/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1629347/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1683988/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1773752/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1796875/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:244317/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1888099/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:1955797/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2007629/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2061937/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2175038/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2197726/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2297072/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2300696/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2348234/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2408950/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2420041/60‑1 (MQ=255) tGATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:2422888/60‑1 (MQ=255)  gATCAAACGTCATCTCCGTCCGTCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATc  <  1:250509/59‑1 (MQ=255)                                                            | TGATCAAACGTCATCTCCGTCCATCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATC  >  W3110S.gb/435414‑435473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑