Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	554229	554278	50	42 [0]	[0] 23	cysS	cysteinyl‑tRNA synthetase

CCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAGG  >  W3110S.gb/554167‑554228                                                              | ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:450354/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2619578/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1003892/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2786299/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2827259/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2850845/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2904846/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:291782/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:348852/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:43220/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2636719/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:535358/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:571901/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:69937/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:714198/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:788158/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:80054/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:918035/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:942871/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:982431/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1742420/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1162309/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1203760/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1228260/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1286580/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1309969/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1436943/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1540875/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1543799/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2439759/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1890259/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1925246/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2087855/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2147791/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2287456/62‑1 (MQ=255) ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2422484/62‑1 (MQ=255)  gccgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2231455/59‑1 (MQ=255)  cgcgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2261868/61‑1 (MQ=255)  cgcgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:920895/61‑1 (MQ=255)   gcgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:2865036/60‑1 (MQ=255)               ccATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAgg  <  1:1240726/48‑1 (MQ=255)                            attattGAACTCACTGAACAACTGATCGCCAAAgg  <  1:34872/35‑1 (MQ=255)                                                              | CCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAGG  >  W3110S.gb/554167‑554228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑