Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1000190	1000207	18	23 [0]	[0] 3	ycbS	predicted outer membrane usher protein

CCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCT  >  W3110S.gb/1000129‑1000189                                                             | cccTGAACGTTGGGATGAAGGGATGAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:2765010/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:2136558/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:903417/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:784821/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:747121/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:5408/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:415274/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:384052/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:340189/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:2362432/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:2283260/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:1193698/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:2101652/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:1948345/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:1801156/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:1692070/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:1618287/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:1571665/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:1539826/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:1467346/61‑1 (MQ=255) cccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:1218506/61‑1 (MQ=255)  ccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:347060/60‑1 (MQ=255)  ccTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCt  <  1:1514745/60‑1 (MQ=255)                                                             | CCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCT  >  W3110S.gb/1000129‑1000189

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑